#include <compressible_neo_hookean.h>

Inheritance diagram for CompressibleNeoHookeanInterface< dim, spacedim, LAC >:

Public Member Functions
	~CompressibleNeoHookeanInterface ()

	CompressibleNeoHookeanInterface ()

void	declare_parameters (ParameterHandler &prm)

void	parse_parameters_call_back ()

template<typename EnergyType , typename ResidualType >
void	energies_and_residuals (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, FEValuesCache< dim, spacedim > &scratch, std::vector< EnergyType > &energies, std::vector< std::vector< ResidualType > > &local_residuals, bool compute_only_system_terms) const

void	compute_system_operators (const DoFHandler< dim, spacedim > &, const std::vector< shared_ptr< LATrilinos::BlockMatrix > >, LinearOperator< LATrilinos::VectorType > &, LinearOperator< LATrilinos::VectorType > &) const

	~CompressibleNeoHookeanInterface ()

	CompressibleNeoHookeanInterface ()

void	declare_parameters (ParameterHandler &prm)

void	parse_parameters_call_back ()

template<typename Number >
void	preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopyPreconditioner &, Number &energy) const

template<typename Number >
void	system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, Number &energy) const

void	compute_system_operators (const DoFHandler< dim, spacedim > &, const TrilinosWrappers::BlockSparseMatrix &, const TrilinosWrappers::BlockSparseMatrix &, const std::vector< shared_ptr< MAT > >, LinearOperator< VEC > &, LinearOperator< VEC > &) const

	~CompressibleNeoHookeanInterface ()

	CompressibleNeoHookeanInterface ()

void	declare_parameters (ParameterHandler &prm)

void	parse_parameters_call_back ()

template<typename Number >
void	preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopyPreconditioner &, Number &energy) const

template<typename Number >
void	system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, Number &energy) const

void	compute_system_operators (const DoFHandler< dim, spacedim > &, const TrilinosWrappers::BlockSparseMatrix &, const TrilinosWrappers::BlockSparseMatrix &, LinearOperator< VEC > &, LinearOperator< VEC > &) const

Public Member Functions inherited from ConservativeInterface< dim, spacedim, dim, CompressibleNeoHookeanInterface< dim, spacedim >, LADealII >
virtual	~ConservativeInterface ()

	ConservativeInterface (const std::string &name="", const std::string &default_fe="FE_Q(1)", const std::string &default_component_names="u", const std::string &default_coupling="", const std::string &default_preconditioner_coupling="", const std::string &default_differential_components="")

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopySystem &d, Sdouble &e) const

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopySystem &d, SSdouble &e) const

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopySystem &d, Sdouble &e) const

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopyPreconditioner &d, SSdouble &e) const

Public Member Functions inherited from Interface< dim, spacedim, n_components, LADealII >
virtual	~Interface ()

	Interface (const std::string &name="", const std::string &default_fe="FE_Q(1)", const std::string &default_component_names="u", const std::string &default_coupling="", const std::string &default_preconditioner_coupling="", const std::string &default_differential_components="")

const std::vector< unsigned int >	get_differential_blocks () const

virtual void	set_time (const double &t) const
	update time of all parsed mapped functions More...

virtual void	postprocess_newly_created_triangulation (Triangulation< dim, spacedim > &tria) const
	This function is used to modify triangulation using boundary_id or manifold_id. More...

virtual void	apply_dirichlet_bcs (const DoFHandler< dim, spacedim > &dof_handler, ConstraintMatrix &constraints) const
	Applies Dirichlet boundary conditions. More...

void	apply_neumann_bcs (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< Number > &local_residual) const
	Applies Neumann boundary conditions. More...

void	apply_forcing_terms (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< Number > &local_residual) const
	Applies CONSERVATIVE forcing terms. More...

virtual void	initialize_data (const typename LADealII::VectorType &solution, const typename LADealII::VectorType &solution_dot, const double t, const double alpha) const
	Initialize all data required for the system. More...

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, Sdouble &) const
	Build the energy needed to get the preconditioner in the case it is required just one derivative. More...

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopyPreconditioner &, SSdouble &) const
	Build the energy needed to get the preconditioner in the case it is required two derivatives. More...

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, Sdouble &) const
	Build the energy needed to get the system matrix in the case it is required two derivatives. More...

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, SSdouble &) const
	Build the energy needed to get the system matrix in the case it is required two derivatives. More...

virtual void	get_system_residual (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< Sdouble > &local_residual) const
	Build the residual needed to get the system matrix in the case it is required two derivatives. More...

virtual void	get_system_residual (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< double > &local_residual) const
	Build the residual needed to get the system matrix in the case it is required just one derivative. More...

virtual void	get_preconditioner_residual (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data, std::vector< Sdouble > &local_residual) const
	Build the residual needed to get the preconditioner matrix in the case two derivatives are required. More...

virtual void	compute_system_operators (const DoFHandler< dim, spacedim > &, const typename LADealII::BlockMatrix &, const typename LADealII::BlockMatrix &, const std::vector< shared_ptr< typename LADealII::BlockMatrix > >, LinearOperator< typename LADealII::VectorType > &, LinearOperator< typename LADealII::VectorType > &) const
	Compute linear operators needed by the problem. More...

virtual void	assemble_local_system (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data) const

virtual void	assemble_local_preconditioner (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data) const

virtual shared_ptr< Mapping< dim, spacedim > >	get_mapping (const DoFHandler< dim, spacedim > &, const typename LADealII::VectorType &) const

virtual UpdateFlags	get_jacobian_flags () const

virtual UpdateFlags	get_residual_flags () const

virtual UpdateFlags	get_jacobian_preconditioner_flags () const

virtual UpdateFlags	get_face_flags () const

void	fix_solution_dot_derivative (FEValuesCache< dim, spacedim > &, double) const

void	fix_solution_dot_derivative (FEValuesCache< dim, spacedim > &fe_cache, Sdouble alpha) const

void	fix_solution_dot_derivative (FEValuesCache< dim, spacedim > &fe_cache, SSdouble alpha) const

void	reinit (const Number &alpha, const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, FEValuesCache< dim, spacedim > &fe_cache) const

void	reinit (const Number &alpha, const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, const unsigned int face_no, FEValuesCache< dim, spacedim > &fe_cache) const

virtual void	get_aux_matrix_residuals (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data, std::vector< std::vector< double > > &local_residuals) const

virtual void	get_aux_matrix_residuals (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data, std::vector< std::vector< Sdouble > > &local_residuals) const

virtual void	assemble_local_aux_matrices (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data) const

UpdateFlags	get_aux_matrix_flags (const unsigned int &i) const

const Table< 2, DoFTools::Coupling > &	get_aux_matrix_coupling (const unsigned int &i) const

virtual unsigned int	get_number_of_aux_matrices () const

Public Member Functions inherited from ConservativeInterface< dim, spacedim, dim, CompressibleNeoHookeanInterface< dim, spacedim > >
virtual	~ConservativeInterface ()

	ConservativeInterface (const std::string &name="", const std::string &default_fe="FE_Q(1)", const std::string &default_component_names="u", const std::string &default_coupling="", const std::string &default_preconditioner_coupling="", const std::string &default_differential_components="")

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopySystem &d, Sdouble &e) const

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopySystem &d, SSdouble &e) const

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopySystem &d, Sdouble &e) const

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &c, Scratch &s, CopyPreconditioner &d, SSdouble &e) const

Public Member Functions inherited from Interface< dim, spacedim, n_components, LATrilinos >
virtual	~Interface ()

	Interface (const std::string &name="", const std::string &default_fe="FE_Q(1)", const std::string &default_component_names="u", const std::string &default_coupling="", const std::string &default_preconditioner_coupling="", const std::string &default_differential_components="")

const std::vector< unsigned int >	get_differential_blocks () const

virtual void	set_time (const double &t) const
	update time of all parsed mapped functions More...

virtual void	postprocess_newly_created_triangulation (Triangulation< dim, spacedim > &tria) const
	This function is used to modify triangulation using boundary_id or manifold_id. More...

virtual void	apply_dirichlet_bcs (const DoFHandler< dim, spacedim > &dof_handler, ConstraintMatrix &constraints) const
	Applies Dirichlet boundary conditions. More...

void	apply_neumann_bcs (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< Number > &local_residual) const
	Applies Neumann boundary conditions. More...

void	apply_forcing_terms (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< Number > &local_residual) const
	Applies CONSERVATIVE forcing terms. More...

virtual void	initialize_data (const typename LATrilinos::VectorType &solution, const typename LATrilinos::VectorType &solution_dot, const double t, const double alpha) const
	Initialize all data required for the system. More...

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, Sdouble &) const
	Build the energy needed to get the preconditioner in the case it is required just one derivative. More...

virtual void	get_preconditioner_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopyPreconditioner &, SSdouble &) const
	Build the energy needed to get the preconditioner in the case it is required two derivatives. More...

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, Sdouble &) const
	Build the energy needed to get the system matrix in the case it is required two derivatives. More...

virtual void	get_system_energy (const typename DoFHandler< dim, spacedim >::active_cell_iterator &, Scratch &, CopySystem &, SSdouble &) const
	Build the energy needed to get the system matrix in the case it is required two derivatives. More...

virtual void	get_system_residual (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< Sdouble > &local_residual) const
	Build the residual needed to get the system matrix in the case it is required two derivatives. More...

virtual void	get_system_residual (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data, std::vector< double > &local_residual) const
	Build the residual needed to get the system matrix in the case it is required just one derivative. More...

virtual void	get_preconditioner_residual (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data, std::vector< Sdouble > &local_residual) const
	Build the residual needed to get the preconditioner matrix in the case two derivatives are required. More...

virtual void	compute_system_operators (const DoFHandler< dim, spacedim > &, const typename LATrilinos::BlockMatrix &, const typename LATrilinos::BlockMatrix &, const std::vector< shared_ptr< typename LATrilinos::BlockMatrix > >, LinearOperator< typename LATrilinos::VectorType > &, LinearOperator< typename LATrilinos::VectorType > &) const
	Compute linear operators needed by the problem. More...

virtual void	assemble_local_system (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopySystem &data) const

virtual void	assemble_local_preconditioner (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data) const

virtual shared_ptr< Mapping< dim, spacedim > >	get_mapping (const DoFHandler< dim, spacedim > &, const typename LATrilinos::VectorType &) const

virtual UpdateFlags	get_jacobian_flags () const

virtual UpdateFlags	get_residual_flags () const

virtual UpdateFlags	get_jacobian_preconditioner_flags () const

virtual UpdateFlags	get_face_flags () const

void	fix_solution_dot_derivative (FEValuesCache< dim, spacedim > &, double) const

void	fix_solution_dot_derivative (FEValuesCache< dim, spacedim > &fe_cache, Sdouble alpha) const

void	fix_solution_dot_derivative (FEValuesCache< dim, spacedim > &fe_cache, SSdouble alpha) const

void	reinit (const Number &alpha, const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, FEValuesCache< dim, spacedim > &fe_cache) const

void	reinit (const Number &alpha, const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, const unsigned int face_no, FEValuesCache< dim, spacedim > &fe_cache) const

virtual void	get_aux_matrix_residuals (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data, std::vector< std::vector< double > > &local_residuals) const

virtual void	get_aux_matrix_residuals (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data, std::vector< std::vector< Sdouble > > &local_residuals) const

virtual void	assemble_local_aux_matrices (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, Scratch &scratch, CopyPreconditioner &data) const

UpdateFlags	get_aux_matrix_flags (const unsigned int &i) const

const Table< 2, DoFTools::Coupling > &	get_aux_matrix_coupling (const unsigned int &i) const

virtual unsigned int	get_number_of_aux_matrices () const

Public Member Functions inherited from PDESystemInterface< dim, spacedim, CompressibleNeoHookeanInterface< dim, spacedim, LAC >, LAC >
virtual	~PDESystemInterface ()

	PDESystemInterface (const std::string &name="", const unsigned int &n_components=0, const unsigned int &n_matrices=0, const std::string &default_fe="FE_Q(1)", const std::string &default_component_names="u", const std::string &default_differential_components="")
	Pass initializers to the base class constructor. More...

virtual void	assemble_energies_and_residuals (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, FEValuesCache< dim, spacedim > &scratch, std::vector< Sdouble > &energies, std::vector< std::vector< double > > &local_residuals, bool compute_only_system_terms) const

virtual void	assemble_energies_and_residuals (const typename DoFHandler< dim, spacedim >::active_cell_iterator &cell, FEValuesCache< dim, spacedim > &scratch, std::vector< SSdouble > &energies, std::vector< std::vector< Sdouble > > &local_residuals, bool compute_only_system_terms) const

Additional Inherited Members
Public Attributes inherited from Interface< dim, spacedim, n_components, LADealII >
std::vector< UpdateFlags >	aux_matrix_update_flags

std::vector< Table< 2, DoFTools::Coupling > >	aux_matrix_coupling

Public Attributes inherited from Interface< dim, spacedim, n_components, LATrilinos >
std::vector< UpdateFlags >	aux_matrix_update_flags

std::vector< Table< 2, DoFTools::Coupling > >	aux_matrix_coupling

Protected Attributes inherited from Interface< dim, spacedim, n_components, LADealII >
ParsedMappedFunctions< spacedim, n_components >	forcing_terms

ParsedMappedFunctions< spacedim, n_components >	neumann_bcs

ParsedDirichletBCs< dim, spacedim, n_components >	dirichlet_bcs

std::string	str_diff_comp

std::vector< unsigned int >	_diff_comp

const LADealII::VectorType *	solution
	Solution vector evaluated at time t. More...

LADealII::VectorType	old_solution
	Solution vector evaluated at time t-dt. More...

const LADealII::VectorType *	solution_dot
	Time derivative solution vector evaluated at time t. More...

double	t
	Current time step. More...

double	old_t
	Previous time step. More...

double	alpha

unsigned int	dofs_per_cell

unsigned int	n_q_points

unsigned int	n_face_q_points

Protected Attributes inherited from Interface< dim, spacedim, n_components, LATrilinos >
ParsedMappedFunctions< spacedim, n_components >	forcing_terms

ParsedMappedFunctions< spacedim, n_components >	neumann_bcs

ParsedDirichletBCs< dim, spacedim, n_components >	dirichlet_bcs

std::string	str_diff_comp

std::vector< unsigned int >	_diff_comp

const LATrilinos::VectorType *	solution
	Solution vector evaluated at time t. More...

LATrilinos::VectorType	old_solution
	Solution vector evaluated at time t-dt. More...

const LATrilinos::VectorType *	solution_dot
	Time derivative solution vector evaluated at time t. More...

double	t
	Current time step. More...

double	old_t
	Previous time step. More...

double	alpha

unsigned int	dofs_per_cell

unsigned int	n_q_points

unsigned int	n_face_q_points

Constructor & Destructor Documentation

template<int dim, int spacedim, typename LAC = LATrilinos>

CompressibleNeoHookeanInterface< dim, spacedim, LAC >::~CompressibleNeoHookeanInterface ( )

inline

template<int dim, int spacedim, typename LAC = LATrilinos>

CompressibleNeoHookeanInterface< dim, spacedim, LAC >::~CompressibleNeoHookeanInterface ( )

inline

template<int dim, int spacedim, typename LAC = LATrilinos>

CompressibleNeoHookeanInterface< dim, spacedim, LAC >::CompressibleNeoHookeanInterface ( )

template<int dim, int spacedim, typename LAC = LATrilinos>

CompressibleNeoHookeanInterface< dim, spacedim, LAC >::~CompressibleNeoHookeanInterface ( )

inline

template<int dim, int spacedim, typename LAC = LATrilinos>

CompressibleNeoHookeanInterface< dim, spacedim, LAC >::CompressibleNeoHookeanInterface ( )

Member Function Documentation

template<int dim, int spacedim, typename LAC >

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::compute_system_operators	(	const DoFHandler< dim, spacedim > &	,
		const std::vector< shared_ptr< LATrilinos::BlockMatrix > >	matrices,
		LinearOperator< LATrilinos::VectorType > &	system_op,
		LinearOperator< LATrilinos::VectorType > &	prec_op
	)		const

template<int dim, int spacedim, typename LAC = LATrilinos>

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::compute_system_operators	(	const DoFHandler< dim, spacedim > &	,
		const TrilinosWrappers::BlockSparseMatrix &	,
		const TrilinosWrappers::BlockSparseMatrix &	,
		LinearOperator< VEC > &	,
		LinearOperator< VEC > &
	)		const

template<int dim, int spacedim, typename LAC = LATrilinos>

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::declare_parameters ( ParameterHandler & prm )

virtual

Reimplemented from ConservativeInterface< dim, spacedim, dim, CompressibleNeoHookeanInterface< dim, spacedim > >.

template<int dim, int spacedim, typename LAC = LATrilinos>

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::declare_parameters ( ParameterHandler & prm )

virtual

Reimplemented from ConservativeInterface< dim, spacedim, dim, CompressibleNeoHookeanInterface< dim, spacedim > >.

template<int dim, int spacedim, typename LAC >

template<typename EnergyType , typename ResidualType >

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::energies_and_residuals	(	const typename DoFHandler< dim, spacedim >::active_cell_iterator &	cell,
		FEValuesCache< dim, spacedim > &	scratch,
		std::vector< EnergyType > &	energies,
		std::vector< std::vector< ResidualType > > &	local_residuals,
		bool	compute_only_system_terms
	)		const

template<int dim, int spacedim, typename LAC = LATrilinos>

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::parse_parameters_call_back ( )

virtual

Reimplemented from ConservativeInterface< dim, spacedim, dim, CompressibleNeoHookeanInterface< dim, spacedim > >.

template<int dim, int spacedim, typename LAC = LATrilinos>

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::parse_parameters_call_back ( )

virtual

Reimplemented from ConservativeInterface< dim, spacedim, dim, CompressibleNeoHookeanInterface< dim, spacedim > >.

template<int dim, int spacedim, typename LAC = LATrilinos>

template<typename Number >

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::preconditioner_energy	(	const typename DoFHandler< dim, spacedim >::active_cell_iterator &	,
		Scratch &	,
		CopyPreconditioner &	,
		Number &	energy
	)		const

template<int dim, int spacedim, typename LAC = LATrilinos>

template<typename Number >

void CompressibleNeoHookeanInterface< dim, spacedim, LAC >::system_energy	(	const typename DoFHandler< dim, spacedim >::active_cell_iterator &	,
		Scratch &	,
		CopySystem &	,
		Number &	energy
	)		const

The documentation for this class was generated from the following files:

include/interfaces/compressible_neo_hookean.h
include/old_interfaces/conservative/compressible_neo_hookean_direct.h
include/interfaces/template.h

Public Member Functions

Additional Inherited Members

Constructor & Destructor Documentation

Member Function Documentation