Tutorial: Resolution of an inverse problem¶
Introduction to the inverse problem¶
This tutorial shows how to solve an inverse Poisson problem with Physics-Informed Neural Networks. The problem definition is that of a Poisson problem with homogeneous boundary conditions and it reads: \begin{equation} \begin{cases} \Delta u = e^{-2(x-\mu_1)^2-2(y-\mu_2)^2} \text{ in } \Omega\, ,\\ u = 0 \text{ on }\partial \Omega,\\ u(\mu_1, \mu_2) = \text{ data} \end{cases} \end{equation} where $\Omega$ is a square domain $[-2, 2] \times [-2, 2]$, and $\partial \Omega=\Gamma_1 \cup \Gamma_2 \cup \Gamma_3 \cup \Gamma_4$ is the union of the boundaries of the domain.
This kind of problem, namely the "inverse problem", has two main goals:
- find the solution $u$ that satisfies the Poisson equation;
- find the unknown parameters ($\mu_1$, $\mu_2$) that better fit some given data (third equation in the system above).
In order to achieve both goals we will need to define an InverseProblem
in PINA.
Let's start with useful imports.
## routine needed to run the notebook on Google Colab
try:
import google.colab
IN_COLAB = True
except:
IN_COLAB = False
if IN_COLAB:
!pip install "pina-mathlab"
# get the data
!mkdir "data"
!wget "https://github.com/mathLab/PINA/raw/refs/heads/master/tutorials/tutorial7/data/pinn_solution_0.5_0.5" -O "data/pinn_solution_0.5_0.5"
!wget "https://github.com/mathLab/PINA/raw/refs/heads/master/tutorials/tutorial7/data/pts_0.5_0.5" -O "data/pts_0.5_0.5"
import matplotlib.pyplot as plt
import torch
import warnings
from pina import Condition, Trainer
from pina.problem import SpatialProblem, InverseProblem
from pina.operator import laplacian
from pina.model import FeedForward
from pina.equation import Equation, FixedValue
from pina.solver import PINN
from pina.domain import CartesianDomain
from pina.optim import TorchOptimizer
from lightning.pytorch import seed_everything
from lightning.pytorch.callbacks import Callback
warnings.filterwarnings("ignore")
seed_everything(883)
Seed set to 883
883
Then, we import the pre-saved data, for ($\mu_1$, $\mu_2$)=($0.5$, $0.5$). These two values are the optimal parameters that we want to find through the neural network training. In particular, we import the input
points (the spatial coordinates), and the target
points (the corresponding $u$ values evaluated at the input
).
data_output = torch.load(
"data/pinn_solution_0.5_0.5", weights_only=False
).detach()
data_input = torch.load("data/pts_0.5_0.5", weights_only=False)
Moreover, let's plot also the data points and the reference solution: this is the expected output of the neural network.
points = data_input.extract(["x", "y"]).detach().numpy()
truth = data_output.detach().numpy()
plt.scatter(points[:, 0], points[:, 1], c=truth, s=8)
plt.axis("equal")
plt.colorbar()
plt.show()
Inverse problem definition in PINA¶
Then, we initialize the Poisson problem, that is inherited from the SpatialProblem
and from the InverseProblem
classes. We here have to define all the variables, and the domain where our unknown parameters ($\mu_1$, $\mu_2$) belong. Notice that the Laplace equation takes as inputs also the unknown variables, that will be treated as parameters that the neural network optimizes during the training process.
def laplace_equation(input_, output_, params_):
"""
Implementation of the laplace equation.
:param LabelTensor input_: Input data of the problem.
:param LabelTensor output_: Output data of the problem.
:param dict params_: Parameters of the problem.
:return: The residual of the laplace equation.
:rtype: LabelTensor
"""
force_term = torch.exp(
-2 * (input_.extract(["x"]) - params_["mu1"]) ** 2
- 2 * (input_.extract(["y"]) - params_["mu2"]) ** 2
)
delta_u = laplacian(output_, input_, components=["u"], d=["x", "y"])
return delta_u - force_term
class Poisson(SpatialProblem, InverseProblem):
r"""
Implementation of the inverse 2-dimensional Poisson problem in the square
domain :math:`[0, 1] \times [0, 1]`,
with unknown parameter domain :math:`[-1, 1] \times [-1, 1]`.
"""
output_variables = ["u"]
x_min, x_max = -2, 2
y_min, y_max = -2, 2
spatial_domain = CartesianDomain({"x": [x_min, x_max], "y": [y_min, y_max]})
unknown_parameter_domain = CartesianDomain({"mu1": [-1, 1], "mu2": [-1, 1]})
domains = {
"g1": CartesianDomain({"x": [x_min, x_max], "y": y_max}),
"g2": CartesianDomain({"x": [x_min, x_max], "y": y_min}),
"g3": CartesianDomain({"x": x_max, "y": [y_min, y_max]}),
"g4": CartesianDomain({"x": x_min, "y": [y_min, y_max]}),
"D": CartesianDomain({"x": [x_min, x_max], "y": [y_min, y_max]}),
}
conditions = {
"g1": Condition(domain="g1", equation=FixedValue(0.0)),
"g2": Condition(domain="g2", equation=FixedValue(0.0)),
"g3": Condition(domain="g3", equation=FixedValue(0.0)),
"g4": Condition(domain="g4", equation=FixedValue(0.0)),
"D": Condition(domain="D", equation=Equation(laplace_equation)),
"data": Condition(input=data_input, target=data_output),
}
problem = Poisson()
Then, we define the neural network model we want to use. Here we used a model which imposes hard constrains on the boundary conditions, as also done in the Wave tutorial!
model = FeedForward(
layers=[20, 20, 20],
func=torch.nn.Softplus,
output_dimensions=len(problem.output_variables),
input_dimensions=len(problem.input_variables),
)
After that, we discretize the spatial domain.
problem.discretise_domain(20, "grid", domains=["D"])
problem.discretise_domain(
1000,
"random",
domains=["g1", "g2", "g3", "g4"],
)
Here, we define a simple callback for the trainer. We use this callback to save the parameters predicted by the neural network during the training. The parameters are saved every 100 epochs as torch
tensors in a specified directory (tmp_dir
in our case).
The goal is to read the saved parameters after training and plot their trend across the epochs.
# temporary directory for saving logs of training
tmp_dir = "tmp_poisson_inverse"
class SaveParameters(Callback):
"""
Callback to save the parameters of the model every 100 epochs.
"""
def on_train_epoch_end(self, trainer, __):
if trainer.current_epoch % 100 == 99:
torch.save(
trainer.solver.problem.unknown_parameters,
"{}/parameters_epoch{}".format(tmp_dir, trainer.current_epoch),
)
Then, we define the PINN
object and train the solver using the Trainer
.
max_epochs = 1500
pinn = PINN(
problem, model, optimizer=TorchOptimizer(torch.optim.Adam, lr=0.005)
)
# define the trainer for the solver
trainer = Trainer(
solver=pinn,
accelerator="cpu",
max_epochs=max_epochs,
default_root_dir=tmp_dir,
enable_model_summary=False,
callbacks=[SaveParameters()],
train_size=1.0,
val_size=0.0,
test_size=0.0,
)
trainer.train()
GPU available: False, used: False
TPU available: False, using: 0 TPU cores
HPU available: False, using: 0 HPUs
Missing logger folder: tmp_poisson_inverse/lightning_logs
`Trainer.fit` stopped: `max_epochs=1500` reached.
One can now see how the parameters vary during the training by reading the saved solution and plotting them. The plot shows that the parameters stabilize to their true value before reaching the epoch $1000$!
epochs_saved = range(99, max_epochs, 100)
parameters = torch.empty((int(max_epochs / 100), 2))
for i, epoch in enumerate(epochs_saved):
params_torch = torch.load(
"{}/parameters_epoch{}".format(tmp_dir, epoch), weights_only=False
)
for e, var in enumerate(pinn.problem.unknown_variables):
parameters[i, e] = params_torch[var].data
# Plot parameters
plt.close()
plt.plot(epochs_saved, parameters[:, 0], label="mu1", marker="o")
plt.plot(epochs_saved, parameters[:, 1], label="mu2", marker="s")
plt.ylim(-1, 1)
plt.grid()
plt.legend()
plt.xlabel("Epoch")
plt.ylabel("Parameter value")
plt.show()
What's next?¶
We have shown the basic usage PINNs in inverse problem modelling, further extensions include:
Train using different Physics Informed strategies
Try on more complex problems
Many more...